Installing hdf5-json¶ Instructions for installing hdf5-json library and utilties. Prerequisites¶ A computer running a 64-bit version of Windows, Mac OS X, or Linux. You will also need the following Python packages: Python 2.7, 3.3, 3.4, or 3.5; NumPy 1.10.4 or later; h5py 2.5 or later. Feb 03, 2020 It looks like the path to the installed HDF5 library is messed up and I think you need shared HDF5 in order to work with H5Py. I installed H5Py on my Mac 10.6.8 by building HDF5. Jun 21, 2013 Then, We have to install gfortran. I currently choose to use the relevant tar-file provided at the High Performance Computing web page. There are up-to-date distributions for some systems (only Mac OS X 10.7 (Lion) and 10.8 (Mountain Lion) as of the last update of this page). Build Configuration¶. Compiling OpenMC with CMake is carried out in two steps. First, cmake is run to determine the compiler, whether optional packages (MPI, HDF5) are available, to generate a list of dependencies between source files so that they may be compiled in the correct order, and to generate a normal Makefile. How to install HDF5 and h5py supporting MPI on OS X. Works on Mac OS 10.11.6, HDF5 1.8.17. Download and install dependencies like zlib, openmpi.

Install The Hdf5 Library Mac Os 10
Hdf5 Install Windows

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commented Mar 17, 2018

When installing tables received the error message 'Could not find a local HDF5 installation'. Packages should install without error regardless of dependencies. If your dependencies are faulty and or cannot be installed via pip you should choose different dependencies and/or enhance them so that they can be installed via pip.

Full error log:

commented Mar 17, 2018•

pip is installing tables from source, because there are no pre-built wheels available for python-3.4 on Mac OSX.

If you can upgrade to python>=3.5 you can use the wheels that come with HDF5. pip install tables will work out of the box, without the need to install deps yourself. If you need to stay on python-3.4 you need to install the HDF5 libraries as described in the installation sections of the user's guide: http://www.pytables.org/usersguide/installation.html

Install The Hdf5 Library Mac Os 10

closed this Mar 17, 2018

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commented Mar 17, 2018

commented Mar 17, 2018•

Install The Hdf5 Library Mac Os 10

Hdf5 Install Windows

commented Mar 17, 2018